About me

I am a bioinformatician, with a background in statistics and agronomy.

I am currently a research engineer in INRAE, Rennes.

My current research interests include :

• The chraracterization of the rainbow trout microtranscriptome in order to characterize miRna biomarkers
• The exploration of the genomic diversity of the downy mildiou (in collaboration with INRAE UMR SAVE, Bordeaux)

I was a PhD student in GenScale team (INRIA/IRISA) and EGI team (INRA Igepp) in Rennes, France.

Two contributions of my PhD :

• Strain level characterization of the pea aphid symbionts by analysis of SNP profiles (paper in Microbiome)
• Developpment of MinYS, a new method for reference guided assembly in metagenomic context (available on github and NAR-gab)